Yücel O, Holert J, Ludwig KC, Thierbach S, Philipp B (2017) A novel steroid-coenzyme A ligase from Novosphingobium sp. strain Chol11 is essential for an alternative degradation pathway for bile salts.
Applied and Environmental Microbiology, Oct 20. pii: AEM.01492-17. doi: 10.1128/AEM.01492-17 (Epub ahead of print)

Zecher K, Suleiman M, Wibberg D, Winkler A, Philipp B, Kalinowski J (2017) Draft Genome Sequence of Donghicola sp. Strain KarMa, a Model Organism for Monomethylamine-Degrading Nonmethylotrophic Bacteria.
Genome Announcements Feb 16,5(7). pii:e01623-16, doi: 10.1128/genomeA.01623-16

*Suleiman M, *Zecher K, Yücel O, Jagmann N, Philipp B (2016) Interkindom Cross-Feeding of Ammonium from Marine Methylamine-Degrading Bacteria to the Diatom Phaeodactylum tricornutum.
Applied and Environmental Microbiology, doi:10.1128/AEM.01642-16. *These authors contributed equally to the paper.

Yücel O, Drees S, Jagmann N, Patschkowski T, Philipp B (2016) An unexplored pathway for degradation of cholate requires a 7α-hydroxysteroid dehydratase and contributes to a broad metabolic repertoire for the utilization of bile salts in Novosphingobium sp. strain Chol11.
Environmental Microbiology, doi: 10.1111/1462-2920.13534

Jagmann N, Bleicher V, Busche T, Kalinowski J, Philipp B (2016) The guanidinobutyrase GbuA is essential for the alkylquinolone-regulated pyocyanin production during parasitic growth of Pseudomonas aeruginosa in co-culture with Aeromonas hydrophila.
Enivronmental Microbiology 201 June 20. doi: 10.1111/1462-2920.13419

Holert J, Yücel O, Jagmann N, Prestel A, Möller H, Philipp B (2015) Identification of bypass reactions leading to the formation of one central steroid degradation intermediate in metabolism of different bile salts in Pseudomonas sp. strain Chol1.
Enivronmental Microbiology 2015 Dec 22. doi: 10.1111/1462-2920.13192

Zecher K, Jagmann N, Seemann P, Philipp B (2015) An efficient screening method for the isolation of heterotrophic bacteria influencing growth of diatoms under photoautotrophic conditions.
Journal of Microbiological Methods 119: 154-162

Molina-Fuentes Á, Pacheco D, Marín P, Philipp B, Schink B, Marqués S (2015) Identification of the gene cluster for the anaerobic degradation of 3,5-dihydroxybenzoate (α-resorcylate) in Thauera aromatica strain AR-1
Applied and Environmental Microbiology 81: 7201-7214

Jagmann N, Henke SF, Philipp B (2015) Cells of Escherichia coli are protected against severe chemical stress by co-habiting cell aggregates formed by Pseudomonas aeruginosa.
Applied Microbiology and Biotechnology DOI: 10.1007/s00253-015-6726-7

Windler M, Leinweber K, Rio Bartulos C, Philipp B, Kroth PG (2014) Biofilm and capsule formation of the diatom Achnanthidium minutissimum are effected by a bacterium.
Journal of Phycology 51: 343-355 DOI: 10.1111/jpy.12280

Jagmann N, Philipp B (2014) Design of synthetic microbial communities for biotechnological production processes.
Journal of Biotechnology 184: 209-218

Holert J, *Yücel O, Suvekbala V, Kulic Z, Möller HM, Philipp B (2014) Evidence of distinct pathways for bacterial degradation of the steroid compound cholate indicates the potential for metabolic interactions by interspecies cross-feeding.
Environmental Microbiology 16: 1424-1440
*these authors contributed equally to the paper.

Barrientos A, Merino, E,Casabon I, Rodriguez J, Crowe AM, Holert J, Philipp B, Eltis LD, Olivera ER, Luengo JM (2014) Functional analysis of three acyl-CoA synthetases involved in bile acids degradation in Pseudomonas putida DOC21.
Environmental Microbiology DOI: 10.1111/1462-2920.12395

Hauck D, Joachim I, Frommeyer B, Varrot A, Philipp B, Möller HM, Imberty A, Exner TE, Titz A (2013) Discovery of two classes of potent glycomimetic inhibitors of Pseudomonas aeruginosa LecB with distinct binding modes.
ACS Chemical Biology 8: 1775-1784

Holert J, Jagmann N, Philipp B (2013) The essential function of genes for a hydratase and an aldehyde dehydrogenase for growth of Pseudomonas sp. strain Chol1 with the steroid compound cholate indicates an aldolytic reaction step for deacetylation of the side chain.
Journal of Bacteriology. doi: 10.1128/JB.00410-13

Jagmann N, Philipp B (2013) Fightin' for chitin: Wie Bakterien beim Abbau von Polymeren konkurrieren.
BIOspektrum 2/13: 137-139

Holert J, Kulic Z, Yücel O, Suvekbala V, Suter MJ-F, Möller H, Philipp B (2013) Degradation of the acyl side chain of the steroid compound cholate in Pseudomonas sp. strain Chol1 proceeds via an aldehyde intermediate.
Journal of Bacteriology 195: 585-595

Holert J, Alam I, Larsen M, Antunés A, Bajic VB, Stingl U, Philipp B (2013) Genome sequence of Pseudomonas sp. strain Chol1, a model organism for the degradation of bile salts and other steroid compounds.
Genome Announcements 1: DOI: 10.1128/genomeA.00014-12

Philipp B, Schink B (2012) Different strategies in anaerobic biodegradation of aromatic compounds: nitrate reducers versus strict anaerobes.
Environmental Microbiology Reports, 4: 469-478

Jagmann N, von Rekowski KS, Philipp B
(2012) Interactions of bacteria with different mechanisms for chitin degradation result in the formation of a mixed-species biofilm.
FEMS Microbiology Letters 326: 69-75

Birkenmaier A, Müller H, Philipp B
(2011) Identification of a thiolase gene essential for beta-oxidation of the acyl side chain of the steroid compound cholate in Pseudomonas sp. strain Chol1.
FEMS Microbiology Letters 318: 123-130

Philipp B
(2011) Bacterial degradation of bile salts.
Applied Microbiology and Biotechnology 89: 903-915

Jagmann N, H-P Brachvogel, B Philipp (2010) Parasitic growth of Pseudomonas aeruginosa in co-culture with the chitinolytic bacterium Aeromonas hydrophila.
Environmental Microbiology 12: 1787-1802

Klebensberger J, Birkenmaier A, Geffers R, Kjelleberg S, Philipp B (2009) SiaA and SiaD are essential for inducing autoaggregation as a specific response to detergent stress in Pseudomonas aeruginosa.
Environmental Microbiology 11: 3073-3086

Philipp B (2009) Zellaggregation als Überlebensstrategie beim Wachstum mit Tensiden.
BIOspektrum 6/2009: 696

Styp von Rekowski K, Hempel M, Philipp B (2008) Quorum sensing by N-acylhomoserine lactones is not required for Aeromonas hydrophila during growth with organic particles in lake water microcosms.
Arch Microbiol 189: 475-482

Birkenmaier A, Holert J, Erdbrink H, Möller H, Friemel A, Schönenberger R, Suter MJ-F, Klebensberger J, Philipp B (2007) Biochemical and genetic investigation on initial reactions in aerobic degradation of the bile acid cholate in Pseudomonas sp. strain Chol1.
Journal of Bacteriology 189: 7165-7173

Darley PI, Hellstern JA, Medina-Bellver JI, Marqués S, Schink B, Philipp B (2007) Heterologous expression and identification of the genes involved in anaerobic degradation of 1,3-dihydroxybenzene (Resorcinol) in Azoarcus anaerobius.
Journal of Bacteriology 189: 3824-3833

Klebensberger J, Lautenschlager K, Bressler D, Wingender J and Philipp B (2007) Detergent-induced cell aggregation in subpopulations of Pseudomonas aeruginosa as a pre-adaptive survival strategy.
Environmental Microbiology 9: 2247-2259

Müller N, Hempel M, Philipp B, Gross E (2007) Degradation of gallic acid and hydolysable polyphenols is constitutively activated in the freshwater plant-associated bacterium Matsuebacter sp. FB25.
Aquatic Microbial Ecology 47: 83-97

Philipp B, Hoff M, Germa F, Schink B, Beimborn D, Mersch-Sundermann V (2007) Biochemical interpretation of quantitative structure activity relationships (QSAR) for biodegradation of N-heterocycles: A complementary approach to predict biodegradability.
Environmental Science & Technology 41: 1390-1398

Klebensberger J, Rui O, Fritz E, Schink B, Philipp B (2006) Cell aggregation of Pseudomonas aeruginosa strain PAO1 as an energy-dependent stress response during growth with sodium dodecyl sulfate.
Arch Microbiol 185: 417-427

Philipp B, Erdbrink H, Suter MJF, Schink B (2006) Degradation of and sensitivity to cholate in Pseudomonas sp. strain Chol1.
Arch Microbiol 185: 192-201

Chhabra SR, Philipp B, Eberl L, Givskov M, Williams P, Cámara M (2005) Extracelluar communication in bacteria. In: Schulz S (ed.) The chemistry of pheromones and other semiochemicals II.
Topics in Current Chemistry 240: 279-315

Yates EA, Philipp B, Buckley C, Atkinson S, Chhabra SR, Sockett RE, Goldner M , Dessaux Y , Cámara M, Smith H, Williams P (2002) N-Acylhomoserine lactones undergo lactonolysis in a pH, temperature and acyl chain length dependent manner during growth of Yersinia pseudotuberculosis and Pseudomonas aeruginosa.
Infect Immun 70: 5635-46

Philipp B, Kemmler D, Hellstern J, Gorny N, Caballero A, Schink B (2002) Anaerobic degradation of protocatechuate (3,4-dihydroxybenzoate) by Thauera aromatica strain AR-1.
FEMS Microbiol Lett 212: 139-143

Rorije E , Germa F, Philipp B, Schink B, Beimborn DB (2002) Predicting biodegradability from structure: Imidazoles.
SAR & QSAR in Environmental Research 13: 199-204

Bussmann I , Philipp B, Schink B (2001) Factors influencing the cultivability of lake water bacteria.
Journal of Microbiological Methods 47: 41-50

Reichenbecher W, Philipp B, Suter M, Schink B (2000) Hydroxyhydroquinone reductase, the first enzyme in hydroxyhydroquinone (1,2,4-trihydroxy-benzene) degradation by Desulfovibrio inopinatus.
Arch Microbiol 173: 206-212

Esteve-Nunez A , Lucchesi G, Philipp B, Schink B, Ramos JL (2000) Respiration of 2,4,6-trinitrotoluene by Pseudomonas sp. Strain JLR11.
J Bacteriol 182: 1352-1355

Schink B, Philipp B, Müller J (2000) Anaerobic degradation of phenolic compounds.
Naturwissenschaften 87: 12-23

Philipp B, Schink B (2000) Two distinct pathways for anaerobic degradation of aromatic compounds by the denitrifying bacterium Thauera aromatica strain AR-1.
Arch Microbiol 173: 91-96

Springer N, Ludwig W, Philipp B, Schink B (1998) Azoarcus anaerobius sp. nov.: A resorcinol-degrading, strictly anaerobic denitrifying bacterium.
Int J Syst Bacteriol 48: 953-956

Philipp B, Schink B (1998) Evidence of two oxidative reactions initiating anaerobic degradation of resorcinol (1,3 dihydroxybenzene) by the denitrifying bacterium Azoarcus anaerobius.
J Bacteriol 180: 3644-3649

Wehrmann A, Philipp B, Sahm H, Eggeling L (1998) The different modes of diaminopimelate (m-DAP) synthesis and their role in cell wall integrity: A study with Corynebacterium glutamicum.
J Bacteriol 180: 3159-3165