Publications
- Elser, JJ, Acquisti, C, and Kumar, S. . “Stoichiogenomics: the evolutionary ecology of macromolecular elemental composition.” Trends in Ecology & Evolution 26 (1): 38–44. doi: 10.1016/j.tree.2010.10.006.
- He, F, Chen, WH, Collins, S, Acquisti, C, Goebel, U, Ramos-Onsins, S, Lercher, MJ, and de Meaux, J. . “Assessing the Influence of Adjacent Gene Orientation on the Evolution of Gene Upstream Regions in Arabidopsis thaliana.” Genetics 185 (2): 695–701. doi: 10.1534/genetics.110.114629.
- Acquisti, C, Kumar, S, and Elser, JJ. . “Signatures of nitrogen limitation in the elemental composition of the proteins involved in the metabolic apparatus.” Proceedings of the Royal Society B: Biological Sciences 276 (1667): 2605–2610. doi: 10.1098/rspb.2008.1960.
- Acquisti, C, Elser, JJ, and Kumar, S. . “Ecological nitrogen limitation shapes the DNA composition of plant genomes.” Molecular Biology and Evolution 26 (5): 953–6. doi: 10.1093/molbev/msp038.
- Acquisti, C, Poste, G, Curtiss, D, and Kumar, S. . “Nullomers: Really a Matter of Natural Selection?” PloS one 2 (10). doi: 10.1371/journal.pone.0001022.
- Collins, S, de Meaux, J, and Acquisti, C. . “Adaptive walks toward a moving optimum.” Genetics 176 (2): 1089–1099. doi: 10.1534/genetics.107.072926.
- Acquisti, C, Kleffe, J, and Collins, S. . “Oxygen content of transmembrane proteins over macroevolutionary time scales.” Nature 445 (7123): 47–52. doi: 10.1038/nature05450.
- Acquisti, C, Allegrini, P, Bogani, P, Buiatti, M, Catanese, E, Fronzoni, L, Grigolini, P, Mersi, G, and Palatella, L. . “In the search for the low-complexity sequences in prokaryotic and eukaryotic genomes: how to derive a coherent picture from global and local entropy measures.” Chaos, Solitons and Fractals 20 (1): 127–137. doi: 10.1016/S0960-0779(03)00435-1.
- Buiatti, M., Acquisti, C., Mersi, G., Bogani, P., and Fronzoni, L. . “The living state of matter: between noise and homeorrhetic constraints.” in Non-extensive entropy interdisciplinary applications., edited by M. Gell-Mann and C. Tsallis. Oxford.
- Acquisti, C., Mersi, G., and Buiatti, M. . “A computational model of a developing tumor cord.” in Mathematical Modeling & Computing in Biology and Medicine., edited by V. Capasso. Bologna.
- Buiatti, M., Acquisti, C., Mersi, G., Bogani, P., and Buiatti, M.jr. . “The biological meaning of DNA correlations.” in Fractals in Biology and Medicine., edited by Losa G.A., Merlini D., Nonnenmacher T.F., Weibel and E.R.. Basel.