## Uses of Class
info.bioinfweb.jphyloio.formats.nexus.commandreaders.AbstractNexusCommandEventReader

- Packages that use AbstractNexusCommandEventReader
  Package | Description
  --- | ---
  info.bioinfweb.jphyloio.formats.nexus.commandreaders | Contains general classes for reading Nexus commands.
  info.bioinfweb.jphyloio.formats.nexus.commandreaders.all | Contains implementations of `NexusCommandEventReader` for commands that are valid in all Nexus blocks.
  info.bioinfweb.jphyloio.formats.nexus.commandreaders.characters | Contains classes for reading Nexus commands in a `CHARACTERS`, `UNALIGNED` or `DATA` block.
  info.bioinfweb.jphyloio.formats.nexus.commandreaders.sets | Contains classes for reading Nexus commands in a `SETS` block.
  info.bioinfweb.jphyloio.formats.nexus.commandreaders.taxa | Contains classes for reading Nexus commands in a `TAXA` block.
  info.bioinfweb.jphyloio.formats.nexus.commandreaders.trees | Contains classes for reading Nexus commands in a `TREES` block.

- - ### Uses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders

    Subclasses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders
    Modifier and Type | Class and Description
    --- | ---
    `class` | `AbstractKeyValueCommandReader`
    `class` | `DefaultCommandReader` Default Nexus command reader for all unsupported Nexus commands.

  - ### Uses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.all

    Subclasses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.all
    Modifier and Type | Class and Description
    --- | ---
    `class` | `LinkReader` Reads the `LINK` command of a Nexus block and stores the links in the shared information map of the stream data provider under the key `NexusReaderStreamDataProvider.INFO_KEY_BLOCK_LINKS`.
    `class` | `TitleReader` Reads the `TITLE` command of a Nexus block and stores the title in the shared information map of the stream data provider under the key `NexusReaderStreamDataProvider.INFO_KEY_BLOCK_TITLE`.

  - ### Uses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.characters

    Subclasses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.characters
    Modifier and Type | Class and Description
    --- | ---
    `class` | `AbstractCharLabelsReader` Implements shared functionality for Nexus command readers that process character (alignment column) definitions.
    `class` | `CharLabelsReader` Nexus reader for the `CHARLABELS` command that produces `CharacterDefinitionEvent`s.
    `class` | `CharStateLabelsReader` Nexus reader for the `CHARSTATELABELS` command that produces `CharacterDefinitionEvent`s.
    `class` | `DimensionsReader`
    `class` | `FormatReader` Parser for the `Format` command in a `Characters`, `Unaligned` or `Data` block.
    `class` | `MatrixReader` Parser for the `MATRIX` command in a `CHARACTERS`, `UNALIGNED` or `DATA` block.

  - ### Uses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.sets

    Subclasses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.sets
    Modifier and Type | Class and Description
    --- | ---
    `class` | `AbstractNexusSetReader` General reader implementation to read the Nexus commands that define different kinds of sets.
    `class` | `CharSetReader` Parser for the `CHARSET` command in the `SETS` block.
    `class` | `IDBasedSetsReader` Base class for all Nexus readers that create set event streams that consist of `SetElementEvent`s.
    `class` | `TaxSetReader`
    `class` | `TreeSetReader`

  - ### Uses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.taxa

    Subclasses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.taxa
    Modifier and Type | Class and Description
    --- | ---
    `class` | `TaxLabelsReader`

  - ### Uses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.trees

    Subclasses of AbstractNexusCommandEventReader in info.bioinfweb.jphyloio.formats.nexus.commandreaders.trees
    Modifier and Type | Class and Description
    --- | ---
    `class` | `ENewickNetworkReader` Nexus command reader for the custom `NETWORK` command.
    `class` | `TranslateReader`
    `class` | `TreeReader`