# Uses of Package
info.bioinfweb.jphyloio.factory

- Packages that use info.bioinfweb.jphyloio.factory
  Package | Description
  --- | ---
  info.bioinfweb.jphyloio.factory | Contains interfaces and general implementations for creating JPhyloIO readers and writers related to `JPhyloIOReaderWriterFactory`.
  info.bioinfweb.jphyloio.formatinfo | Contains `JPhyloIOFormatInfo` and related classes that describe a format supported by JPhyloIO.
  info.bioinfweb.jphyloio.formats.fasta | Contains classes for reading from and writing to streams/files in FASTA format.
  info.bioinfweb.jphyloio.formats.mega | Contains classes for reading from and writing to streams/files in MEGA format.
  info.bioinfweb.jphyloio.formats.newick | Contains classes for reading from and writing to streams/files in Newick tree format.
  info.bioinfweb.jphyloio.formats.nexml | Contains classes for reading from and writing to streams/files in NeXML format.
  info.bioinfweb.jphyloio.formats.nexus | Contains classes for reading from and writing to streams/files in Nexus format.
  info.bioinfweb.jphyloio.formats.pde | Contains classes for reading from streams/files in PDE format.
  info.bioinfweb.jphyloio.formats.phylip | Contains classes for reading from and writing to streams/files in Phylip format.
  info.bioinfweb.jphyloio.formats.phyloxml | Contains classes for reading from and writing to streams/files in PhyloXML format.
  info.bioinfweb.jphyloio.formats.xml | Contains classes implementing shared functionality for reading from and writing to streams/files in XML formats.
  info.bioinfweb.jphyloio.formats.xtg | Contains classes for reading from and writing to streams/files in XTG format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.factory
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formatinfo
  Class and Description
  JPhyloIOContentExtensionFileFilter
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.fasta
  Class and Description
  AbstractSingleReaderWriterFactory
  AbstractStartStringSingleFactory Abstract single format factory that implements the `checkFormat()` methods by testing of the read content start with a certain string, determined by `AbstractStartStringSingleFactory.getExpectedStart()`.
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.mega
  Class and Description
  AbstractSingleReaderWriterFactory
  AbstractStartStringSingleFactory Abstract single format factory that implements the `checkFormat()` methods by testing of the read content start with a certain string, determined by `AbstractStartStringSingleFactory.getExpectedStart()`.
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.newick
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.nexml
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.nexus
  Class and Description
  AbstractSingleReaderWriterFactory
  AbstractStartStringSingleFactory Abstract single format factory that implements the `checkFormat()` methods by testing of the read content start with a certain string, determined by `AbstractStartStringSingleFactory.getExpectedStart()`.
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.pde
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.phylip
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.phyloxml
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.xml
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.

- Classes in info.bioinfweb.jphyloio.factory used by info.bioinfweb.jphyloio.formats.xtg
  Class and Description
  AbstractSingleReaderWriterFactory
  SingleReaderWriterFactory Implementations of this interface are used internally by `JPhyloIOReaderWriterFactory` to create reader and writer instances of a specific format.