## Uses of Interface
info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter

- Packages that use ObjectListDataAdapter
  Package | Description
  --- | ---
  info.bioinfweb.jphyloio.dataadapters | Contains adapter interfaces that should be implemented by adapters mediating between the business model of an application and implementations of `JPhyloIOEventWriter`.
  info.bioinfweb.jphyloio.dataadapters.implementations | Contains some basic (abstract) implementations of `JPhyloIOEventWriter`.
  info.bioinfweb.jphyloio.dataadapters.implementations.store | Contains implementations of data adapters that directly store their modeled data in mutable lists or maps instead of delegating to an application business model.
  info.bioinfweb.jphyloio.formats.nexus | Contains classes for reading from and writing to streams/files in Nexus format.

- - ### Uses of ObjectListDataAdapter in info.bioinfweb.jphyloio.dataadapters

    Subinterfaces of ObjectListDataAdapter in info.bioinfweb.jphyloio.dataadapters
    Modifier and Type | Interface and Description
    --- | ---
    `interface` | `OTUListDataAdapter` Allows to access data from the application business model that make up an OTU list.

    Methods in info.bioinfweb.jphyloio.dataadapters that return ObjectListDataAdapter
    Modifier and Type | Method and Description
    --- | ---
    `ObjectListDataAdapter<CharacterDefinitionEvent>` | MatrixDataAdapter.`getCharacterDefinitions(ReadWriteParameterMap parameters)` Returns a list of character definitions for the matrix modeled by this instance.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | MatrixDataAdapter.`getCharacterSets(ReadWriteParameterMap parameters)` Returns a list of character sets defined for the matrix modeled by this instance.
    `ObjectListDataAdapter<EdgeEvent>` | TreeNetworkDataAdapter.`getEdges(ReadWriteParameterMap parameters)` Returns the set of edges contained in this tree or network.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | TreeNetworkDataAdapter.`getNodeEdgeSets(ReadWriteParameterMap parameters)` Returns a list of node-and-edge-sets defined for the tree modeled by this instance.
    `ObjectListDataAdapter<NodeEvent>` | TreeNetworkDataAdapter.`getNodes(ReadWriteParameterMap parameters)` Returns the set of nodes contained in this tree or network.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | OTUListDataAdapter.`getOTUSets(ReadWriteParameterMap parameters)` Returns a list of OTU sets defined for the OTU list modeled by this instance.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | MatrixDataAdapter.`getSequenceSets(ReadWriteParameterMap parameters)` Returns a list of sequence sets defined for the matrix modeled by this instance.
    `ObjectListDataAdapter<TokenSetDefinitionEvent>` | MatrixDataAdapter.`getTokenSets(ReadWriteParameterMap parameters)` Returns a list of token sets defined for the matrix modeled by this instance.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | TreeNetworkGroupDataAdapter.`getTreeSets(ReadWriteParameterMap parameters)` Returns a list of tree sets defined for the tree-network-group modeled by this instance.

  - ### Uses of ObjectListDataAdapter in info.bioinfweb.jphyloio.dataadapters.implementations

    Classes in info.bioinfweb.jphyloio.dataadapters.implementations that implement ObjectListDataAdapter
    Modifier and Type | Class and Description
    --- | ---
    `class` | `EmptyObjectListDataAdapter<E extends JPhyloIOEvent>` Empty implementation of `ObjectListDataAdapter`.
    `class` | `UndefinedOTUListDataAdapter`

    Methods in info.bioinfweb.jphyloio.dataadapters.implementations that return ObjectListDataAdapter
    Modifier and Type | Method and Description
    --- | ---
    `ObjectListDataAdapter<CharacterDefinitionEvent>` | NoCharDefsNoSetsMatrixDataAdapter.`getCharacterDefinitions(ReadWriteParameterMap parameters)` Default implementation that always returns an empty object list adapter.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | NoCharDefsNoSetsMatrixDataAdapter.`getCharacterSets(ReadWriteParameterMap parameters)` Default implementation that always returns an empty object list adapter
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | NoSetsTreeNetworkDataAdapter.`getNodeEdgeSets(ReadWriteParameterMap parameters)` Default implementation that always returns an empty object list adapter.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | UndefinedOTUListDataAdapter.`getOTUSets(ReadWriteParameterMap parameters)`
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | NoCharDefsNoSetsMatrixDataAdapter.`getSequenceSets(ReadWriteParameterMap parameters)` Default implementation that always returns an empty object list adapter.
    `ObjectListDataAdapter<TokenSetDefinitionEvent>` | NoCharDefsNoSetsMatrixDataAdapter.`getTokenSets(ReadWriteParameterMap parameters)` Default implementation that always returns an empty object list adapter.
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | NoSetsTreeNetworkGroupDataAdapter.`getTreeSets(ReadWriteParameterMap parameters)` Default implementation that always returns an empty object list adapter.

  - ### Uses of ObjectListDataAdapter in info.bioinfweb.jphyloio.dataadapters.implementations.store

    Classes in info.bioinfweb.jphyloio.dataadapters.implementations.store that implement ObjectListDataAdapter
    Modifier and Type | Class and Description
    --- | ---
    `class` | `StoreObjectListDataAdapter<E extends LabeledIDEvent>`
    `class` | `StoreOTUListDataAdapter`

    Methods in info.bioinfweb.jphyloio.dataadapters.implementations.store that return ObjectListDataAdapter
    Modifier and Type | Method and Description
    --- | ---
    `ObjectListDataAdapter<LinkedLabeledIDEvent>` | StoreTreeNetworkDataAdapter.`getNodeEdgeSets(ReadWriteParameterMap parameters)`

  - ### Uses of ObjectListDataAdapter in info.bioinfweb.jphyloio.formats.nexus

    Methods in info.bioinfweb.jphyloio.formats.nexus that return ObjectListDataAdapter
    Modifier and Type | Method and Description
    --- | ---
    `protected abstract ObjectListDataAdapter<LinkedLabeledIDEvent>` | AbstractNexusSetWriter.`getSets(ElementDataAdapter<? extends LabeledIDEvent> dataSource)`