## Uses of Interface
info.bioinfweb.jphyloio.formatinfo.JPhyloIOFormatInfo

- Packages that use JPhyloIOFormatInfo
  Package | Description
  --- | ---
  info.bioinfweb.jphyloio.factory | Contains interfaces and general implementations for creating JPhyloIO readers and writers related to `JPhyloIOReaderWriterFactory`.
  info.bioinfweb.jphyloio.formatinfo | Contains `JPhyloIOFormatInfo` and related classes that describe a format supported by JPhyloIO.
  info.bioinfweb.jphyloio.formats.fasta | Contains classes for reading from and writing to streams/files in FASTA format.
  info.bioinfweb.jphyloio.formats.mega | Contains classes for reading from and writing to streams/files in MEGA format.
  info.bioinfweb.jphyloio.formats.newick | Contains classes for reading from and writing to streams/files in Newick tree format.
  info.bioinfweb.jphyloio.formats.nexml | Contains classes for reading from and writing to streams/files in NeXML format.
  info.bioinfweb.jphyloio.formats.nexus | Contains classes for reading from and writing to streams/files in Nexus format.
  info.bioinfweb.jphyloio.formats.pde | Contains classes for reading from streams/files in PDE format.
  info.bioinfweb.jphyloio.formats.phylip | Contains classes for reading from and writing to streams/files in Phylip format.
  info.bioinfweb.jphyloio.formats.phyloxml | Contains classes for reading from and writing to streams/files in PhyloXML format.
  info.bioinfweb.jphyloio.formats.xtg | Contains classes for reading from and writing to streams/files in XTG format.

- - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.factory

    Methods in info.bioinfweb.jphyloio.factory that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected abstract JPhyloIOFormatInfo` | AbstractSingleReaderWriterFactory.`createFormatInfo()`
    `JPhyloIOFormatInfo` | AbstractSingleReaderWriterFactory.`getFormatInfo()`
    `JPhyloIOFormatInfo` | SingleReaderWriterFactory.`getFormatInfo()` Returns an information objects describing the target format and providing according file filters.
    `JPhyloIOFormatInfo` | JPhyloIOReaderWriterFactory.`getFormatInfo(java.lang.String formatID)` Returns an information object for the specified format.

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formatinfo

    Classes in info.bioinfweb.jphyloio.formatinfo that implement JPhyloIOFormatInfo
    Modifier and Type | Class and Description
    --- | ---
    `class` | `DefaultFormatInfo` Default implementation of `JPhyloIOFormatInfo`.

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.fasta

    Methods in info.bioinfweb.jphyloio.formats.fasta that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | FASTAFactory.`createFormatInfo()` Returns the FASTA format info including a file filter that specifies the file extensions listed here.

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.mega

    Methods in info.bioinfweb.jphyloio.formats.mega that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | MEGAFactory.`createFormatInfo()`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.newick

    Methods in info.bioinfweb.jphyloio.formats.newick that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | NewickFactory.`createFormatInfo()`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.nexml

    Methods in info.bioinfweb.jphyloio.formats.nexml that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | NeXMLFactory.`createFormatInfo()`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.nexus

    Methods in info.bioinfweb.jphyloio.formats.nexus that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | NexusFactory.`createFormatInfo()`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.pde

    Methods in info.bioinfweb.jphyloio.formats.pde that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | PDEFactory.`createFormatInfo()`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.phylip

    Methods in info.bioinfweb.jphyloio.formats.phylip that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | PhylipFactory.`createFormatInfo()`
    `protected JPhyloIOFormatInfo` | SequentialPhylipFactory.`createFormatInfo()`
    `protected JPhyloIOFormatInfo` | AbstractPhylipFactory.`createFormatInfo(java.lang.String formatID, java.lang.String formatName, java.util.Set<java.lang.String> supportedReaderParameters, java.util.Set<java.lang.String> supportedWriterParameters, java.lang.String adapterDescription)`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.phyloxml

    Methods in info.bioinfweb.jphyloio.formats.phyloxml that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | PhyloXMLFactory.`createFormatInfo()`

  - ### Uses of JPhyloIOFormatInfo in info.bioinfweb.jphyloio.formats.xtg

    Methods in info.bioinfweb.jphyloio.formats.xtg that return JPhyloIOFormatInfo
    Modifier and Type | Method and Description
    --- | ---
    `protected JPhyloIOFormatInfo` | XTGFactory.`createFormatInfo()`