Convert mzML to MGF

Description

Convert fragmentation scans of mzML files to the MGF format. Attention: All MS1 scans are discarded.

Input files

• at least 1 mzML file (.mzml | .mzml.bz2 | .mzml.gz | .mzml.zip)

Output files

This is a converter script which produces a MGF files file for every input mzML file.

Context

No context information available.

Parameters

m/z decimal places

Default: 4

Intensity decimal places

Default: 4

Source code

mzml-to-mgf.rb, mzml-to-mgf.yaml (GitHub)