Tryptic protein digestion

Description

Digest a protein into tryptic peptides, allowing for missed cleavages.

Input files

• optional: FASTA database files (any file)

Output files

• Tryptic peptides (tryptic-peptides.txt)

Context

Parameters

Protein

Default: empty

Missed cleavage sites

Default: 1

Minimum peptide length

Default: 0

Source code

digest-protein.rb, digest-protein.yaml (GitHub)